A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _ 
All Classes All Packages

S

Sample(double) - Method in class HAL.Tools.MultinomialCalc
 
Sample(double) - Method in class HAL.Tools.MultinomialCalcLong
 
Sample(double, double, Rand) - Method in class HAL.Tools.Internal.Gaussian
 
SampleInt(int, double, Rand) - Method in class HAL.Tools.Internal.Binomial
 
SampleIntFast(int, double, Rand) - Method in class HAL.Tools.Internal.Binomial
 
SampleLong(long, double, Rand) - Method in class HAL.Tools.Internal.Binomial
 
SaveState(SerializableModel) - Static method in class HAL.Util
Saves a model state to a byte array and returns it.
SaveState(SerializableModel, String) - Static method in class HAL.Util
Saves a model state to a file with the name specified.
scale - Variable in class HAL.Gui.UIGrid
 
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid1Ddouble
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid1Dint
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid2Ddouble
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid2Dint
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid2Dlong
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid3Dint
multiplies the current field value at the specified index
Scale(int, double) - Method in class HAL.GridsAndAgents.Grid3Dlong
multiplies the current field value at the specified index
Scale(int, int, double) - Method in class HAL.GridsAndAgents.Grid2Ddouble
multiplies the current field value at the specified coordinates
Scale(int, int, double) - Method in class HAL.GridsAndAgents.Grid2Dint
multiplies the current field value at the specified coordinates
Scale(int, int, double) - Method in class HAL.GridsAndAgents.Grid2Dlong
multiplies the current field value at the specified coordinates
Scale(int, int, int, double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
multiplies the current field value at the specified coordinates
Scale(int, int, int, double) - Method in class HAL.GridsAndAgents.Grid3Dint
multiplies the current field value at the specified coordinates
Scale(int, int, int, double) - Method in class HAL.GridsAndAgents.Grid3Dlong
multiplies the current field value at the specified coordinates
Scale(int, long) - Method in class HAL.GridsAndAgents.Grid1Dlong
multiplies the current field value at the specified index
Scale0to1(double, double, double) - Static method in class HAL.Util
returns where the value is from min to max as a number from 0 to 1
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid1Ddouble
adds specified value to all entries of the curr field
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid1Dint
adds specified value to all entries of the curr field
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid2Dlong
adds specified value to all entries of the curr field
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
multiplies all entries in the field by the value
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid3Dint
multiplies all entries in the field by the value
ScaleAll(double) - Method in class HAL.GridsAndAgents.Grid3Dlong
multiplies all entries in the field by the value
ScaleAll(long) - Method in class HAL.GridsAndAgents.Grid1Dlong
adds specified value to all entries of the curr field
ScaleMinToMax(double, double, double) - Static method in class HAL.Util
interpolates value from 0 to 1 to be between min and max
ScoreMutant(T) - Method in interface HAL.Interfaces.GAScoreFunction
 
scratch - Variable in class HAL.GridsAndAgents.PDEGrid3D
 
scratch2 - Variable in class HAL.GridsAndAgents.PDEGrid3D
 
serialfileReader - Variable in class HAL.Tools.FileIO
 
serialfileWriter - Variable in class HAL.Tools.FileIO
 
SerializableModel - Interface in HAL.Interfaces
 
serialobjectReader - Variable in class HAL.Tools.FileIO
 
serialobjectWriter - Variable in class HAL.Tools.FileIO
 
Set(double, double) - Method in class HAL.GridsAndAgents.PDEGrid1D
 
Set(double, double[], double[]) - Method in interface HAL.Tools.ODESolver.Derivative
 
Set(double, double, double) - Method in class HAL.GridsAndAgents.PDEGrid2D
 
Set(double, double, double, double) - Method in class HAL.GridsAndAgents.PDEGrid3D
 
Set(int, boolean) - Method in class HAL.Tools.BoolSet
 
Set(int, double) - Method in class HAL.GridsAndAgents.Grid1Ddouble
sets the current field value at the specified index
Set(int, double) - Method in class HAL.GridsAndAgents.Grid2Ddouble
sets the current field value at the specified index
Set(int, double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
sets the current field value at the specified index
Set(int, double) - Method in class HAL.GridsAndAgents.PDEGrid1D
sets the prev field value at the specified coordinates
Set(int, double) - Method in class HAL.GridsAndAgents.PDEGrid2D
sets the prev field value at the specified index
Set(int, double) - Method in class HAL.GridsAndAgents.PDEGrid3D
sets the current field value at the specified index
Set(int, int) - Method in class HAL.GridsAndAgents.Grid1Dint
sets the current field value at the specified index
Set(int, int) - Method in class HAL.GridsAndAgents.Grid2Dint
sets the current field value at the specified index
Set(int, int) - Method in class HAL.GridsAndAgents.Grid3Dint
sets the current field value at the specified index
Set(int, int) - Method in class HAL.GridsAndAgents.PopulationGridBase
 
Set(int, int) - Method in class HAL.GridsAndAgents.PopulationGridLongBase
 
Set(int, int, double) - Method in class HAL.GridsAndAgents.Grid2Ddouble
sets the current field value at the specified coordinates
Set(int, int, double) - Method in class HAL.GridsAndAgents.PDEGrid2D
sets the prev field value at the specified coordinates
Set(int, int, int) - Method in class HAL.GridsAndAgents.Grid2Dint
sets the current field value at the specified coordinates
Set(int, int, int) - Method in class HAL.GridsAndAgents.PopulationGrid2D
 
Set(int, int, int, double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
sets the current field value at the specified coordinates
Set(int, int, int, double) - Method in class HAL.GridsAndAgents.PDEGrid3D
sets to the current field value at the specified coordinates
Set(int, int, int, int) - Method in class HAL.GridsAndAgents.Grid3Dint
sets the current field value at the specified coordinates
Set(int, int, int, int) - Method in class HAL.GridsAndAgents.PopulationGrid3D
 
Set(int, int, int, int) - Method in class HAL.GridsAndAgents.PopulationGrid3DLong
 
Set(int, int, int, long) - Method in class HAL.GridsAndAgents.Grid3Dlong
sets the current field value at the specified coordinates
Set(int, int, int, T) - Method in class HAL.GridsAndAgents.Grid3Dobject
sets the current field value at the specified coordinates
Set(int, int, long) - Method in class HAL.GridsAndAgents.Grid2Dlong
sets the current field value at the specified coordinates
Set(int, int, long) - Method in class HAL.GridsAndAgents.PopulationGrid2DLong
 
Set(int, int, T) - Method in class HAL.GridsAndAgents.Grid2Dobject
sets the current field value at the specified coordinates
Set(int, long) - Method in class HAL.GridsAndAgents.Grid1Dlong
sets the current field value at the specified index
Set(int, long) - Method in class HAL.GridsAndAgents.Grid2Dlong
sets the current field value at the specified index
Set(int, long) - Method in class HAL.GridsAndAgents.Grid3Dlong
sets the current field value at the specified index
Set(int, T) - Method in class HAL.GridsAndAgents.Grid1Dobject
sets the current field value at the specified index
Set(int, T) - Method in class HAL.GridsAndAgents.Grid2Dobject
sets the current field value at the specified index
Set(int, T) - Method in class HAL.GridsAndAgents.Grid3Dobject
sets the current field value at the specified index
Set(String) - Method in class HAL.Gui.UIBoolInput
sets the boolean value, true, false, t or f are all valid inputs
Set(String) - Method in class HAL.Gui.UIComboBoxInput
ignore
Set(String) - Method in class HAL.Gui.UIDoubleInput
ignore
Set(String) - Method in class HAL.Gui.UIFileChooserInput
ignore
Set(String) - Method in class HAL.Gui.UIIntInput
sets the value of the UIIntInput to the string provided
Set(String) - Method in class HAL.Gui.UIStringInput
ignore
Set(String) - Method in interface HAL.Interfaces.MenuItem
 
Set(String, String) - Method in class HAL.Tools.Internal.ParamSet
sets the value at the specified label to the specified value
SetActive(boolean) - Method in class HAL.Gui.UIBoolInput
 
SetActive(boolean) - Method in class HAL.Gui.UIButton
 
SetActive(boolean) - Method in class HAL.Gui.UIComboBoxInput
 
SetActive(boolean) - Method in class HAL.Gui.UIDoubleInput
 
SetActive(boolean) - Method in class HAL.Gui.UIFileChooserInput
 
SetActive(boolean) - Method in class HAL.Gui.UIGrid
can be used to inactivate the component, preventing drawing and other overhead
SetActive(boolean) - Method in class HAL.Gui.UIIntInput
 
SetActive(boolean) - Method in class HAL.Gui.UILabel
 
SetActive(boolean) - Method in class HAL.Gui.UIPlot
 
SetActive(boolean) - Method in class HAL.Gui.UIStringInput
 
SetActive(boolean) - Method in interface HAL.Interfaces.GuiComp
 
SetAll(double) - Method in class HAL.GridsAndAgents.Grid1Ddouble
sets all squares in current the field to the specified value
SetAll(double) - Method in class HAL.GridsAndAgents.Grid2Ddouble
sets all squares in current the field to the specified value
SetAll(double) - Method in class HAL.GridsAndAgents.Grid3Ddouble
sets all squares in current the field to the specified value
SetAll(double) - Method in class HAL.GridsAndAgents.PDEGrid1D
sets all squares in the delta field to the specified value
SetAll(double) - Method in class HAL.GridsAndAgents.PDEGrid2D
sets all squares in the delta field to the specified value
SetAll(double) - Method in class HAL.GridsAndAgents.PDEGrid3D
sets all squares in the delta field using the vals array
SetAll(double[]) - Method in class HAL.GridsAndAgents.Grid1Ddouble
copies the array argument into the field
SetAll(double[]) - Method in class HAL.GridsAndAgents.Grid2Ddouble
sets all squares in the field to the specified value
SetAll(double[]) - Method in class HAL.GridsAndAgents.PDEGrid1D
sets all squares in the delta field using the vals array
SetAll(double[]) - Method in class HAL.GridsAndAgents.PDEGrid2D
sets all squares in the delta field using the vals array
SetAll(int) - Method in class HAL.GridsAndAgents.Grid1Dint
sets all squares in current the field to the specified value
SetAll(int) - Method in class HAL.GridsAndAgents.Grid2Dint
sets all squares in current the field to the specified value
SetAll(int) - Method in class HAL.GridsAndAgents.Grid3Dint
sets all squares in current the field to the specified value
SetAll(int) - Method in class HAL.GridsAndAgents.PopulationGridBase
 
SetAll(int[]) - Method in class HAL.GridsAndAgents.Grid1Dint
copies the array argument into the field
SetAll(int[]) - Method in class HAL.GridsAndAgents.Grid2Dint
sets all squares in the field to the specified value
SetAll(long) - Method in class HAL.GridsAndAgents.Grid1Dlong
sets all squares in current the field to the specified value
SetAll(long) - Method in class HAL.GridsAndAgents.Grid2Dlong
sets all squares in current the field to the specified value
SetAll(long) - Method in class HAL.GridsAndAgents.Grid3Dlong
sets all squares in current the field to the specified value
SetAll(long) - Method in class HAL.GridsAndAgents.PopulationGridLongBase
 
SetAll(long[]) - Method in class HAL.GridsAndAgents.Grid1Dlong
copies the array argument into the field
SetAll(long[]) - Method in class HAL.GridsAndAgents.Grid2Dlong
 
SetAll(Coords2DColor) - Method in class HAL.Gui.UIGrid
sets every pixel in the UIGrid using the DrawPix function
SetAll(T) - Method in class HAL.GridsAndAgents.Grid1Dobject
sets all squares in current the field to the specified value
SetAll(T) - Method in class HAL.GridsAndAgents.Grid2Dobject
sets all squares in the field to the specified value
SetAll(T) - Method in class HAL.GridsAndAgents.Grid3Dobject
sets all squares in current the field to the specified value
SetAll(T[]) - Method in class HAL.GridsAndAgents.Grid2Dobject
copies the array of values into the field
SetAlpha(int, double) - Static method in class HAL.Util
returns a new color integer based on the input color but with the alpha component changed to the r argument
SetAlpha256(int, int) - Static method in class HAL.Util
returns a new color integer based on the input color but with the alpha component changed to the r argument
SetArray(int, int, double[]) - Method in interface HAL.Interfaces.Coords2DSetArray
 
SetArray(int, int, int, double[]) - Method in interface HAL.Interfaces.Coords3DSetArray
 
SetBirthTick(int) - Method in class HAL.GridsAndAgents.AgentBase
sets the agent's birthtick value, which is used for the Age calculation
SetBit(int, int, boolean) - Static method in class HAL.Util
returns a version of the int v with the bit at position i set to val
SetBit(long, int, boolean) - Static method in class HAL.Util
returns a version of the long v with the bit at position i set to val
SetBlue(int, double) - Static method in class HAL.Util
returns a new color integer based on the input color but with the blue component changed to the r argument
SetBlue256(int, int) - Static method in class HAL.Util
returns a new color integer based on the input color but with the blue component changed to the r argument
SetChar(char, int, int, int, int) - Method in class HAL.Gui.UIGrid
draws a single character to the UIGrid
SetColor(int) - Method in class HAL.Gui.UIWindow
sets the gui background color
SetColor(int, int) - Method in class HAL.Gui.UIBoolInput
 
SetColor(int, int) - Method in class HAL.Gui.UIButton
 
SetColor(int, int) - Method in class HAL.Gui.UIComboBoxInput
 
SetColor(int, int) - Method in class HAL.Gui.UIDoubleInput
 
SetColor(int, int) - Method in class HAL.Gui.UIFileChooserInput
 
SetColor(int, int) - Method in class HAL.Gui.UIIntInput
 
SetColor(int, int) - Method in class HAL.Gui.UILabel
 
SetColor(int, int) - Method in class HAL.Gui.UIStringInput
 
SetColor(Color, Color) - Method in class HAL.Gui.UIBoolInput
sets the foreground and background of the UIBoolInput
SetColor(Color, Color) - Method in class HAL.Gui.UIButton
sets the foreground and background of the UIButton
SetColor(Color, Color) - Method in class HAL.Gui.UIComboBoxInput
sets the foreground and background of the UIComboBoxInput
SetColor(Color, Color) - Method in class HAL.Gui.UIDoubleInput
sets the foreground and background of the UIDoubleInput
SetColor(Color, Color) - Method in class HAL.Gui.UIFileChooserInput
sets the foreground and background of the UIFileChooserInput
SetColor(Color, Color) - Method in class HAL.Gui.UIIntInput
sets the foreground and background of the UIIntInput
SetColor(Color, Color) - Method in class HAL.Gui.UILabel
sets the foreground and background of the UILabel
SetColor(Color, Color) - Method in class HAL.Gui.UIStringInput
sets the foreground and background of the UIStringInput
SetDims(double, double, double, double) - Method in class HAL.Gui.UIPlot
 
SetFile(File) - Method in class HAL.Gui.UIFileChooserInput
sets the selected file
SetGreen(int, double) - Static method in class HAL.Util
returns a new color integer based on the input color but with the green component changed to the r argument
SetGreen256(int, int) - Static method in class HAL.Util
returns a new color integer based on the input color but with the green component changed to the r argument
SetGui(String, String) - Method in class HAL.Tools.Internal.ParamSet
sets the gui component with the provided label to val
SetGuiAll(String[]) - Method in class HAL.Tools.Internal.ParamSet
set all gui values with the vals array provided
SetLabels(String[]) - Method in class HAL.Tools.Internal.ParamSet
sets all labels with the labels array provided
SetLables(String[]) - Method in class HAL.Gui.UIWindow
 
SetNandPInt(int, double) - Method in class HAL.Tools.Internal.Binomial
 
SetNandPLong(long, double) - Method in class HAL.Tools.Internal.Binomial
 
SetNonNegative() - Method in class HAL.GridsAndAgents.PDEGrid1D
ensures that all values will be non-negative on the next timestep, call before Update
SetNonNegative() - Method in class HAL.GridsAndAgents.PDEGrid2D
ensures that all values will be non-negative on the next timestep, call before Update
SetNonNegative() - Method in class HAL.GridsAndAgents.PDEGrid3D
ensures that all values will be non-negative on the next timestep, call before Update
SetParam(String, String) - Method in class HAL.Gui.UIWindow
 
SetParamChangeAction(ParamSetChangeAction) - Method in class HAL.Gui.UIWindow
 
SetParamChangeAction(ParamSetChangeAction) - Method in class HAL.Tools.Internal.ParamSet
 
SetParamValues(String[]) - Method in class HAL.Gui.UIWindow
 
SetPix(int, int) - Method in class HAL.Gui.OpenGL2DWindow
duplicates UIGrid functionality, draws a rectangle large enough to fill one lattice position
SetPix(int, int) - Method in class HAL.Gui.UIGrid
sets an individual pixel on the GridWindow.
SetPix(int, int) - Method in interface HAL.Interfaces.Coords2DColor
 
SetPix(int, int, int) - Method in class HAL.Gui.OpenGL2DWindow
duplicates UIGrid functionality, draws a rectangle large enough to fill one lattice position
SetPix(int, int, int) - Method in class HAL.Gui.UIGrid
sets an individual pixel on the GridWindow.
SetPix(int, int, ColorIntGenerator) - Method in class HAL.Gui.UIGrid
same functionality as SetPix with a color argument, but instead takes a ColorIntGenerator function (a function that takes no arguments and returns an int).
SetPix(int, ColorIntGenerator) - Method in class HAL.Gui.UIGrid
same functionality as SetPix with a color argument, but instead takes a ColorIntGenerator function (a function that takes no arguments and returns an int).
SetPixRect(int, int, int, int, int) - Method in class HAL.Gui.UIGrid
 
SetPixXY(int, int, int) - Method in class HAL.Gui.OpenGL3DWindow
 
SetPixXZ(int, int, int) - Method in class HAL.Gui.OpenGL3DWindow
 
SetPixYZ(int, int, int) - Method in class HAL.Gui.OpenGL3DWindow
 
SetPop(long) - Method in class HAL.Tools.PhylogenyTracker.Genome
sets the active population size for this genome to a specific value.
SetRect(int, int, int, int, Coords2DColor) - Method in class HAL.Gui.UIGrid
sets a rectangular section of the UIGrid using the ColorFn argument
SetRed(int, double) - Static method in class HAL.Util
returns a new color integer based on the input color but with the red component changed to the r argument
SetRed256(int, int) - Static method in class HAL.Util
returns a new color integer based on the input color but with the red component changed to the r argument
SetSafe(int, boolean) - Method in class HAL.Tools.BoolSet
 
SetString(String, int, int, int, int) - Method in class HAL.Gui.UIGrid
draws a string to the UIGrid on a single line.
SetString(String, int, int, int, int, int) - Method in class HAL.Gui.UIGrid
 
SetString(String, int, int, int, int, int, int) - Method in class HAL.Gui.UIGrid
 
SetText(String) - Method in class HAL.Gui.UIButton
 
SetText(String) - Method in class HAL.Gui.UILabel
 
Setup(int) - Method in class HAL.Tools.MultinomialCalc
 
Setup(long) - Method in class HAL.Tools.MultinomialCalcLong
 
SetupConstructors() - Method in interface HAL.Interfaces.SerializableModel
 
SetupSparseIndices() - Method in class HAL.GridsAndAgents.PopulationGridBase
 
SetupSparseIndices() - Method in class HAL.GridsAndAgents.PopulationGridLongBase
 
SetVals(String[]) - Method in class HAL.Tools.Internal.ParamSet
sets all values with the vals array provided
SetValsAndLabels(String[], String[]) - Method in class HAL.Gui.UIWindow
 
SetValsAndLabels(String[], String[]) - Method in class HAL.Tools.Internal.ParamSet
sets both the vals and labels with the arrays provided
SetVars(double[]) - Method in interface HAL.Tools.Modularity.VarSet
 
Shuffle(double[]) - Method in class HAL.Rand
 
Shuffle(double[], int) - Method in class HAL.Rand
 
Shuffle(double[], int, int) - Method in class HAL.Rand
Shuffles an array of doubles
Shuffle(int[]) - Method in class HAL.Rand
 
Shuffle(int[], int) - Method in class HAL.Rand
 
Shuffle(int[], int, int) - Method in class HAL.Rand
Shuffles an array of integers
Shuffle(Object[]) - Method in class HAL.Rand
 
Shuffle(Object[], int, int) - Method in class HAL.Rand
Shuffles an array of objects
ShuffleAgents(Rand) - Method in class HAL.GridsAndAgents.AgentGrid0D
shuffles the agent list to randomize iteration do not call this while in the middle of iteration
ShuffleAgents(Rand) - Method in class HAL.GridsAndAgents.AgentGrid1D
shuffles the agent list to randomize iteration.
ShuffleAgents(Rand) - Method in class HAL.GridsAndAgents.AgentGrid2D
shuffles the agent list to randomize iteration.
ShuffleAgents(Rand) - Method in class HAL.GridsAndAgents.AgentGrid3D
shuffles the agent list to randomize iteration.
ShuffleAgents(Rand) - Method in class HAL.GridsAndAgents.AgentList
Shuffles the agentlist order (Don't run during agent iteration)
Sigmoid(double, double) - Static method in class HAL.Util
transforms val with a sigmoid curve with a minCap of 0, a maxCap of 1, and an inflectionX value of 0
Sigmoid(double, double, double, double, double) - Static method in class HAL.Util
transforms val with a sigmoid curve with the given properties
Sort(IsEntry1Before2, SwapEntries, int) - Static method in class HAL.Util
 
Sortable - Interface in HAL.Interfaces
allows for the QuickSort function to be used to sort the object
SphericalAgent2D<A extends SphericalAgent2D,​G extends AgentGrid2D<A>> - Class in HAL.GridsAndAgents
Spherical cow model of 2D cells
SphericalAgent2D() - Constructor for class HAL.GridsAndAgents.SphericalAgent2D
 
SphericalAgent3D<A extends SphericalAgent3D,​G extends AgentGrid3D<A>> - Class in HAL.GridsAndAgents
Spherical cow model of 3D cells
SphericalAgent3D() - Constructor for class HAL.GridsAndAgents.SphericalAgent3D
 
split() - Method in class HAL.Tools.Internal.SplittableRN
Constructs and returns a new SplittableRandom instance that shares no mutable state with this instance.
SplittableRN - Class in HAL.Tools.Internal
A generator of uniform pseudorandom values applicable for use in (among other contexts) isolated parallel computations that may generate subtasks.
SplittableRN() - Constructor for class HAL.Tools.Internal.SplittableRN
Creates a new SplittableRandom instance that is likely to generate sequences of values that are statistically independent of those of any other instances in the current program; and may, and typically does, vary across program invocations.
SplittableRN(long) - Constructor for class HAL.Tools.Internal.SplittableRN
Creates a new SplittableRandom instance using the specified initial seed.
Square(double, double, double, int) - Method in class HAL.Gui.OpenGL2DWindow
 
Step() - Method in class HAL.Tools.MultiWellExperiment.MultiWellExperiment
runs a single timestep
Step(T, int) - Method in interface HAL.Tools.MultiWellExperiment.StepWell
 
StepMultiThread() - Method in class HAL.Tools.MultiWellExperiment.MultiWellExperiment
runs a single multithreaded step
StepWell<T> - Interface in HAL.Tools.MultiWellExperiment
 
SubsetIndices(int[], int, IndexBool) - Static method in class HAL.Util
subsets a set of indices such that all indices evaluate to true under the EvalFun
SumForces(double, AgentGrid2D<T>, OverlapForceResponse2D<T>) - Method in class HAL.GridsAndAgents.SphericalAgent2D
 
SumForces(double, AgentGrid2D<T>, OverlapForceResponse2D<T>, Rand) - Method in class HAL.GridsAndAgents.SphericalAgent2D
similar to the SumForces function above, but it can be used with other AgentGrids
SumForces(double, AgentGrid3D<T>, OverlapForceResponse3D<T>) - Method in class HAL.GridsAndAgents.SphericalAgent3D
similar to the SumForces function above, but it can be used with other AgentGrids
SumForces(double, OverlapForceResponse2D<A>) - Method in class HAL.GridsAndAgents.SphericalAgent2D
The interactionRad argument is a double that specifies how far apart to check for other agent centers to interact with, and should be set to the maximum distance apart that two interacting agent centers can be.
SumForces(double, OverlapForceResponse2D<A>, Rand) - Method in class HAL.GridsAndAgents.SphericalAgent2D
 
SumForces(double, OverlapForceResponse3D<A>) - Method in class HAL.GridsAndAgents.SphericalAgent3D
The interactionRad argument is a double that specifies how far apart to check for other agent centers to interact with, and should be set to the maximum distance apart that two interacting agent centers can be.
SumForces(ArrayList<T>, ArrayList<double[]>, OverlapForceResponse2D<T>) - Method in class HAL.GridsAndAgents.SphericalAgent2D
 
SumForces(ArrayList<T>, ArrayList<double[]>, OverlapForceResponse3D<T>) - Method in class HAL.GridsAndAgents.SphericalAgent3D
 
SumTo1(double[]) - Static method in class HAL.Util
sets the values in the array such that they sum to 1
SumTo1(double[], int, int) - Static method in class HAL.Util
sets the values in the array such that they sum to 1, using only the numbers between start and end
Swap(int, int) - Method in interface HAL.Interfaces.Sortable
should swap the objects at these indices so that they switch places in their data structure
Swap(int, int) - Method in interface HAL.Interfaces.SwapEntries
 
SwapEntries - Interface in HAL.Interfaces
 
SwapPosition(AgentSQ1Dunstackable<T>) - Method in class HAL.GridsAndAgents.AgentSQ1Dunstackable
swaps the positions of two agents.
SwapPosition(AgentSQ2Dunstackable<T>) - Method in class HAL.GridsAndAgents.AgentSQ2Dunstackable
swaps the positions of two agents.
SwapPosition(AgentSQ3Dunstackable<T>) - Method in class HAL.GridsAndAgents.AgentSQ3Dunstackable
swaps the positions of two agents.
SweepRun<T> - Class in HAL.Tools.Internal
Created by rafael on 4/15/17.
SweepRun(ParallelFunction, int) - Constructor for class HAL.Tools.Internal.SweepRun
 
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z _ 
All Classes All Packages